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  • Chris Jewell's avatar
    Add time axis to Rt · 215a0ee0
    Chris Jewell authored
    1. The posterior NGM is now not saved, only the sum over all destinations to give $R_{it}$
    2. Replace Rt as the dominant eigenvalue of the NGM with weighted average by population size.
    3. now contains both $R_{it}$ and $R_t$ posterior predictive values.