Merge requests · Chris Jewell / covid19uk

Improve efficiency of stochastic model.

!1 · created Mar 27, 2020 by Chris Jewell stochastic
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updated Mar 27, 2020
Add requirements.txt file

!3 · created Mar 27, 2020 by Chris Jewell stochastic
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updated Mar 27, 2020
Rewrite Multinomial as hand rolled iterated binomial.

!2 · created Mar 27, 2020 by Chris Jewell stochastic
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- 6
updated Mar 28, 2020
Fix binomial probs errors

!4 · created Mar 28, 2020 by Chris Jewell stochastic
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updated Mar 28, 2020
Added ESS Calculation

!7 · created Apr 01, 2020 by Chris Jewell ode_model
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updated Apr 01, 2020
Use casting and tf.gather to avoid end-to-end XLA failure

!11 · created May 21, 2020 by Chris Jewell stochastic-da-dev
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updated May 21, 2020
Pair programming changes from 2020-06-12

!12 · created Jun 12, 2020 by Chris Jewell stochastic-da-dev
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updated Jun 12, 2020
Avoid overflow bug in computing free_events

!13 · created Jun 19, 2020 by Chris Jewell stochastic-da-dev
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- 1
updated Jun 19, 2020
Stochastic da dev

!15 · created Jul 30, 2020 by Chris Jewell
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updated Jul 30, 2020
Ruffus pipeline

!16 · created Jan 10, 2021 by Chris Jewell production
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updated Jan 10, 2021
0.5.0rc0

!17 · created Feb 03, 2021 by Chris Jewell
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updated Feb 03, 2021
Make data summaries weekly

!18 · created Feb 08, 2021 by Chris Jewell
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updated Feb 08, 2021
Added mean summary longformat

!19 · created Feb 08, 2021 by Chris Jewell
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updated Feb 08, 2021
Add missing 21 day incidence and prevalence summary.

!20 · created Feb 09, 2021 by Chris Jewell
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updated Feb 09, 2021
Created lower bound for posterior events chunk size

!21 · created Feb 15, 2021 by Chris Jewell
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updated Feb 15, 2021
Fixed incorrect events dimension

!22 · created Feb 15, 2021 by Chris Jewell
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updated Feb 15, 2021
Fix 1-day time shift in insample7 predictive distn

!23 · created Feb 17, 2021 by Chris Jewell
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updated Feb 18, 2021
Switched to NetCDF4 storage of predictive output

!25 · created Feb 24, 2021 by Chris Jewell
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updated Feb 24, 2021
Weekly 100k

!26 · created Feb 24, 2021 by Chris Jewell
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updated Feb 24, 2021
Added insample7 summary to summary_longformat.xlsx

!27 · created Mar 03, 2021 by Chris Jewell
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updated Mar 03, 2021