1. 25 Sep, 2020 1 commit
    • Chris Jewell's avatar
      Refactored model specification · e52283b6
      Chris Jewell authored
      Changes:
      
      1. Created a TFP JointDistribution to represent full probability model;
      2. Renamed CovidUKStochastic --> DiscreteTimeStateTransitionModel;
      3. DiscreteTimeStateTransitionModel now inherits from tfp.Distribution.
      e52283b6
  2. 08 Jul, 2020 1 commit
    • Chris Jewell's avatar
      Added occult inference capability · cad36259
      Chris Jewell authored
      Changes:
      
      1. Added occult Metropolis Hastings update.
      2. Factored out Categorical2 distribution for use by both event time move and occults.
      3. Refactored mcmc.py script for HDF5 output purposes
      4. Apply compression to HDF5 output file.
      cad36259