Commit 2e132884 authored by Chris Jewell's avatar Chris Jewell
Browse files

Typo in README

parent 8002f73e
......@@ -7,11 +7,11 @@ Bayesian stochastic SEIR COVID19 model for the UK](https://github.com/chrism0dwk
The recommended method of running the pipeline is as a Docker container which may be bound to a local results directory, local config file, and optionally takes a `--date-range` parameter.
For example, to run pipeline version `v0.1.1-alpha.2` over an 84 day time period ending 3 days ago, and saving results to a local directory `/local_results` use:
For example, to run pipeline version `v0.1.1-alpha.4` over an 84 day time period ending 3 days ago, and saving results to a local directory `/local_results` use:
```
$ docker run --rm \
-v /local_results:/results chrism0dwk/lancs-covid-pipeline:0.1.1-alpha.2 \
-v /local_results:/results chrism0dwk/lancs-covid-bayesstm:0.1.1-alpha.4 \
--date-range `date -d "-87 days" +%F` `date -d "-3 days" +%F`
```
......@@ -20,7 +20,7 @@ The latest version of the pipeline may be determined from the [Dockerhub](https:
The default `config.yaml` file is set up to configure the MCMC for an approximate 84 day window. However, the file may be edited and supplied to the container like so:
```
$ docker run --rm \
-v /local_results:/results chrism0dwk/lancs-covid-pipeline:0.1.1-alpha.2 \
-v /local_results:/results chrism0dwk/lancs-covid-bayesstm:0.1.1-alpha.4 \
-v /absolute/path/to/config.yaml:/app/config.yaml \
--date-range `date -d "-87 days" +%F` `date -d "-3 days" +%F`
```
......
[tool.poetry]
name = "covid-pipeline"
version = "0.1.1-alpha.3"
version = "0.1.1-alpha.4"
description = "COVID19 daily production"
authors = ["Chris Jewell <c.jewell@lancaster.ac.uk>"]
license = "MIT"
......
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