BIOL132 Introductory Biostats for 1st year biology students.
Code for clustering of binary symptom data.
Examples of epidemic likelihood functions
An R package implementing a modified Reynolds 1986 flocking algorithm.
GPU implementation of a variogram, wrapped as an R package.
Making Uber H3 hexagons for polygon areas, with sample UK data.
Inhibitory close pairs design.
This is the repository for the main InFER (Inference for Epidemic Risk) package.
R package to read InFER HDF5-format MCMC output files
Network epidemic package.
Notes from a seminar on RHDF5.
Sequential testing study for COVID-19
sourceR R package to fit source attribution models
Scripts for reproducing the results in our paper on high-dimensional prediction over subgroups.