Explore projects
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A Bayesian ZIP model which uses covariates on both the Poisson and Binomial parts.
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Scripts for reproducing the results in our paper on high-dimensional prediction over subgroups.
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Lisa Koeppel / pymc3SamplerProject
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Lisa Koeppel / PyMC3_Epi_Extension
MIT LicenseThis project contains the Python code for the PhD thesis titled "Joint epidemic and spatio-temporal approach for modelling disease outbreaks" at Lancaster University supervised by Dr. Chris Jewell and Prof. Dr. Peter Neal.
It provides an extension to the Python probabilistic programming library PyMC3 with a sampler to effectively impute missing infection and removal time data. Furthermore, it integrates a mechanistic modeling approach into an epidemiological modeling setting.
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Chris Jewell / isveeSIR
GNU General Public License v3.0 onlyUpdated