Explore projects

This is the repository for the main InFER (Inference for Epidemic Risk) package.

sourceR R package to fit source attribution models

sourceR R package to fit source attribution models

Making Uber H3 hexagons for polygon areas, with sample UK data.

Sequential testing study for COVID-19

Code for clustering of binary symptom data.

Network epidemic package.

Experiments with ZigZag on SIR epidemic models.

Inhibitory close pairs design.

Examples of epidemic likelihood functions

An R package implementing a modified Reynolds 1986 flocking algorithm.

Scripts for reproducing the results in our paper on high-dimensional prediction over subgroups.

Notes from a seminar on RHDF5.

A Bayesian ZIP model which uses covariates on both the Poisson and Binomial parts.

R package to read InFER HDF5-format MCMC output files