sourceR R package to fit source attribution models
Code for clustering of binary symptom data.
Pseudomarginal inference on SIR and SIS models, motivated by Rebecca Lester's community study...hence the package name.
Network epidemic package.
Inhibitory close pairs design.
Examples of epidemic likelihood functions
The DRUM agent-based model.
Algorithm examples for GEM project
Language examples for epidemic modelling language
An R package implementing a modified Reynolds 1986 flocking algorithm.
Experiments with ZigZag on SIR epidemic models.