GitLab

Inhibitory close pairs design.

Examples of epidemic likelihood functions

Experiments with ZigZag on SIR epidemic models.

GPU implementation of a variogram, wrapped as an R package.

sourceR R package to fit source attribution models

Algorithm examples for GEM project

BIOL132 Introductory Biostats for 1st year biology students.

The DRUM agent-based model.

This is the repository for the main InFER (Inference for Epidemic Risk) package.

A Bayesian ZIP model which uses covariates on both the Poisson and Binomial parts.

Code for clustering of binary symptom data.

R package to read InFER HDF5-format MCMC output files

Scripts for reproducing the results in our paper on high-dimensional prediction over subgroups.

Sequential testing study for COVID-19